No. words: 1093; after pruning: 1067


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   10    0.0 7.4 (1,1:513)  487  0.00 0.20 0.00  BE499309Ta13P059H01P026B111F1_008.ab1        4   504 (40)  C BE499309Ta13P059H01P026B111R1_008.ab1   (37)   512    11 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
10       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C BE499309Ta13P059H01P026B111R1_008.ab1   549 
  251    BE499309Ta13P059H01P026B111F1_008.ab1   216 
  255  C BE499309Ta13P059H01P026B111R1_008.ab1   295 
  423    BE499309Ta13P059H01P026B111F1_008.ab1   388 
  427  C BE499309Ta13P059H01P026B111R1_008.ab1   123 
  439    BE499309Ta13P059H01P026B111F1_008.ab1   404 
  447  C BE499309Ta13P059H01P026B111R1_008.ab1   103 
  475    BE499309Ta13P059H01P026B111F1_008.ab1   440 
  479  C BE499309Ta13P059H01P026B111R1_008.ab1    71 
  487    BE499309Ta13P059H01P026B111F1_008.ab1   452 
Contig length: old 579, new 579

Contig length: old 579, new 579
New start: 0