No. words: 1079; after pruning: 1053


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 3.9 (1,1:496)  476  0.00 0.20 0.20  BE499309Ta14P059H01P026B111F1_006.ab1        4   497 (47)  C BE499309Ta14P059H01P026B111R1_006.ab1   (41)   494     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE499309Ta14P059H01P026B111R1_006.ab1   535 
  115    BE499309Ta14P059H01P026B111F1_006.ab1    76 
  119  C BE499309Ta14P059H01P026B111R1_006.ab1   417 
  131    BE499309Ta14P059H01P026B111F1_006.ab1    92 
  135  C BE499309Ta14P059H01P026B111R1_006.ab1   401 
  371    BE499309Ta14P059H01P026B111F1_006.ab1   332 
  379  C BE499309Ta14P059H01P026B111R1_006.ab1   157 
  387    BE499309Ta14P059H01P026B111F1_006.ab1   348 
  399  C BE499309Ta14P059H01P026B111R1_006.ab1   137 
  407    BE499309Ta14P059H01P026B111F1_006.ab1   368 
  411  C BE499309Ta14P059H01P026B111R1_006.ab1   125 
  423    BE499309Ta14P059H01P026B111F1_006.ab1   384 
  431  C BE499309Ta14P059H01P026B111R1_006.ab1   105 
  443    BE499309Ta14P059H01P026B111F1_006.ab1   404 
  455  C BE499309Ta14P059H01P026B111R1_006.ab1    81 
  459    BE499309Ta14P059H01P026B111F1_006.ab1   420 
  463  C BE499309Ta14P059H01P026B111R1_006.ab1    73 
  471    BE499309Ta14P059H01P026B111F1_006.ab1   432 
  479  C BE499309Ta14P059H01P026B111R1_006.ab1    57 
  499    BE499309Ta14P059H01P026B111F1_006.ab1   460 
Contig length: old 582, new 583

Contig length: old 583, new 583
New start: 0