No. words: 875; after pruning: 849


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:394)  390  0.00 0.00 0.00  BE499309Ta18P059C02P026B111F1_061.ab1        1   395 (51)  C BE499309Ta18P059C02P026B111R1_061.ab1   (34)   395     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1  C BE499309Ta18P059C02P026B111R1_061.ab1   429 
  271    BE499309Ta18P059C02P026B111F1_061.ab1   237 
  295  C BE499309Ta18P059C02P026B111R1_061.ab1   135 
  315    BE499309Ta18P059C02P026B111F1_061.ab1   281 
  323  C BE499309Ta18P059C02P026B111R1_061.ab1   107 
  331    BE499309Ta18P059C02P026B111F1_061.ab1   297 
  335  C BE499309Ta18P059C02P026B111R1_061.ab1    95 
  351    BE499309Ta18P059C02P026B111F1_061.ab1   317 
  355  C BE499309Ta18P059C02P026B111R1_061.ab1    75 
  383    BE499309Ta18P059C02P026B111F1_061.ab1   349 
  395  C BE499309Ta18P059C02P026B111R1_061.ab1    35 
  407    BE499309Ta18P059C02P026B111F1_061.ab1   373 
Contig length: old 480, new 480

Contig length: old 480, new 480
New start: 0