No. words: 1079; after pruning: 1053


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 3.9 (1,1:496)  472  0.00 0.40 0.20  BE499309Ta20P059H01P026B111F1_025.ab1        4   497 (46)  C BE499309Ta20P059H01P026B111R1_025.ab1   (41)   495     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BE499309Ta20P059H01P026B111R1_025.ab1   536 
   89    BE499309Ta20P059H01P026B111F1_025.ab1    49 
   97  C BE499309Ta20P059H01P026B111R1_025.ab1   440 
  113    BE499309Ta20P059H01P026B111F1_025.ab1    73 
  117  C BE499309Ta20P059H01P026B111R1_025.ab1   420 
  133    BE499309Ta20P059H01P026B111F1_025.ab1    93 
  137  C BE499309Ta20P059H01P026B111R1_025.ab1   400 
  369    BE499309Ta20P059H01P026B111F1_025.ab1   329 
  381  C BE499309Ta20P059H01P026B111R1_025.ab1   156 
  385    BE499309Ta20P059H01P026B111F1_025.ab1   345 
  413  C BE499309Ta20P059H01P026B111R1_025.ab1   124 
  417    BE499309Ta20P059H01P026B111F1_025.ab1   377 
  437  C BE499309Ta20P059H01P026B111R1_025.ab1   100 
  441    BE499309Ta20P059H01P026B111F1_025.ab1   401 
  457  C BE499309Ta20P059H01P026B111R1_025.ab1    80 
  461    BE499309Ta20P059H01P026B111F1_025.ab1   421 
  465  C BE499309Ta20P059H01P026B111R1_025.ab1    72 
  481    BE499309Ta20P059H01P026B111F1_025.ab1   441 
Contig length: old 582, new 583

Contig length: old 583, new 583
New start: 0