No. words: 1094; after pruning: 1068


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   14    0.0 3.3 (1,1:512)  478  0.00 0.20 0.20  BE499309Ta22P059H01P026B111F1_021.ab1        4   499 (45)  C BE499309Ta22P059H01P026B111R1_021.ab1   (40)   510    15 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
14       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE499309Ta22P059H01P026B111R1_021.ab1   550 
   88    BE499309Ta22P059H01P026B111F1_021.ab1    50 
   92  C BE499309Ta22P059H01P026B111R1_021.ab1   459 
  128    BE499309Ta22P059H01P026B111F1_021.ab1    90 
  136  C BE499309Ta22P059H01P026B111R1_021.ab1   415 
  384    BE499309Ta22P059H01P026B111F1_021.ab1   346 
  388  C BE499309Ta22P059H01P026B111R1_021.ab1   163 
  404    BE499309Ta22P059H01P026B111F1_021.ab1   366 
  412  C BE499309Ta22P059H01P026B111R1_021.ab1   139 
  440    BE499309Ta22P059H01P026B111F1_021.ab1   402 
  452  C BE499309Ta22P059H01P026B111R1_021.ab1    99 
  468    BE499309Ta22P059H01P026B111F1_021.ab1   430 
  480  C BE499309Ta22P059H01P026B111R1_021.ab1    71 
  492    BE499309Ta22P059H01P026B111F1_021.ab1   454 
Contig length: old 581, new 582

Contig length: old 582, new 582
New start: 0