No. words: 1101; after pruning: 1075


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 4.1 (1,1:514)  486  0.00 0.40 0.00  BE499309Ta23P059H01P026B111F1_019.ab1        4   507 (41)  C BE499309Ta23P059H01P026B111R1_019.ab1   (40)   513     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BE499309Ta23P059H01P026B111R1_019.ab1   553 
  134    BE499309Ta23P059H01P026B111F1_019.ab1    95 
  138  C BE499309Ta23P059H01P026B111R1_019.ab1   416 
  338    BE499309Ta23P059H01P026B111F1_019.ab1   299 
  346  C BE499309Ta23P059H01P026B111R1_019.ab1   208 
  354    BE499309Ta23P059H01P026B111F1_019.ab1   315 
  378  C BE499309Ta23P059H01P026B111R1_019.ab1   176 
  386    BE499309Ta23P059H01P026B111F1_019.ab1   347 
  406  C BE499309Ta23P059H01P026B111R1_019.ab1   148 
  418    BE499309Ta23P059H01P026B111F1_019.ab1   379 
  434  C BE499309Ta23P059H01P026B111R1_019.ab1   120 
  438    BE499309Ta23P059H01P026B111F1_019.ab1   399 
  486  C BE499309Ta23P059H01P026B111R1_019.ab1    68 
  494    BE499309Ta23P059H01P026B111F1_019.ab1   455 
Contig length: old 586, new 587

Contig length: old 587, new 587
New start: 0