No. words: 1103; after pruning: 1077


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   10    0.0 6.5 (1,1:513)  487  0.00 0.20 0.00  BE499309Td01P059H01P026B111F1_015.ab1        4   504 (46)  C BE499309Td01P059H01P026B111R1_015.ab1   (41)   512    11 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
10       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C BE499309Td01P059H01P026B111R1_015.ab1   553 
  441    BE499309Td01P059H01P026B111F1_015.ab1   402 
  457  C BE499309Td01P059H01P026B111R1_015.ab1    97 
  473    BE499309Td01P059H01P026B111F1_015.ab1   434 
  477  C BE499309Td01P059H01P026B111R1_015.ab1    77 
  485    BE499309Td01P059H01P026B111F1_015.ab1   446 
  489  C BE499309Td01P059H01P026B111R1_015.ab1    65 
  493    BE499309Td01P059H01P026B111F1_015.ab1   454 
  505  C BE499309Td01P059H01P026B111R1_015.ab1    49 
  509    BE499309Td01P059H01P026B111F1_015.ab1   470 
  513  C BE499309Td01P059H01P026B111R1_015.ab1    41 
  529    BE499309Td01P059H01P026B111F1_015.ab1   490 
Contig length: old 589, new 589

Contig length: old 589, new 589
New start: 0