No. words: 1095; after pruning: 1069


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   15    0.0 3.1 (1,1:513)  478  0.00 0.20 0.20  BE499309Td04P059H01P026B111F1_009.ab1        4   499 (45)  C BE499309Td04P059H01P026B111R1_009.ab1   (40)   511    16 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
15       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE499309Td04P059H01P026B111R1_009.ab1   551 
  132    BE499309Td04P059H01P026B111F1_009.ab1    94 
  136  C BE499309Td04P059H01P026B111R1_009.ab1   416 
  392    BE499309Td04P059H01P026B111F1_009.ab1   354 
  400  C BE499309Td04P059H01P026B111R1_009.ab1   152 
  408    BE499309Td04P059H01P026B111F1_009.ab1   370 
  412  C BE499309Td04P059H01P026B111R1_009.ab1   140 
  424    BE499309Td04P059H01P026B111F1_009.ab1   386 
  432  C BE499309Td04P059H01P026B111R1_009.ab1   120 
  440    BE499309Td04P059H01P026B111F1_009.ab1   402 
  452  C BE499309Td04P059H01P026B111R1_009.ab1   100 
  492    BE499309Td04P059H01P026B111F1_009.ab1   454 
Contig length: old 581, new 582

Contig length: old 582, new 582
New start: 0