No. words: 1102; after pruning: 1076


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 3.1 (1,1:519)  491  0.00 0.20 0.00  BE499309Td06P059H01P026B111F1_005.ab1       10   514 (37)  C BE499309Td06P059H01P026B111R1_005.ab1   (39)   512     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C BE499309Td06P059H01P026B111R1_005.ab1   551 
  439    BE499309Td06P059H01P026B111F1_005.ab1   408 
  451  C BE499309Td06P059H01P026B111R1_005.ab1   101 
  491    BE499309Td06P059H01P026B111F1_005.ab1   460 
  503  C BE499309Td06P059H01P026B111R1_005.ab1    49 
  507    BE499309Td06P059H01P026B111F1_005.ab1   476 
Contig length: old 582, new 582

Contig length: old 582, new 582
New start: 0