No. words: 1100; after pruning: 1074


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   14    0.0 7.1 (1,1:512)  478  0.00 0.40 0.00  BE499309Td07P059H01P026B111F1_003.ab1        4   498 (50)  C BE499309Td07P059H01P026B111R1_003.ab1   (41)   511    15 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
14       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE499309Td07P059H01P026B111R1_003.ab1   552 
  409    BE499309Td07P059H01P026B111F1_003.ab1   369 
  413  C BE499309Td07P059H01P026B111R1_003.ab1   140 
  425    BE499309Td07P059H01P026B111F1_003.ab1   385 
  433  C BE499309Td07P059H01P026B111R1_003.ab1   120 
  441    BE499309Td07P059H01P026B111F1_003.ab1   401 
  453  C BE499309Td07P059H01P026B111R1_003.ab1   100 
  473    BE499309Td07P059H01P026B111F1_003.ab1   433 
  477  C BE499309Td07P059H01P026B111R1_003.ab1    76 
  493    BE499309Td07P059H01P026B111F1_003.ab1   453 
  505  C BE499309Td07P059H01P026B111R1_003.ab1    48 
  509    BE499309Td07P059H01P026B111F1_003.ab1   469 
Contig length: old 587, new 588

Contig length: old 588, new 588
New start: 0