No. words: 1093; after pruning: 1067


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 3.3 (1,1:508)  477  0.00 0.40 0.20  BE499309Td08P059H01P026B111F1_001.ab1        4   503 (42)  C BE499309Td08P059H01P026B111R1_001.ab1   (41)   507     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE499309Td08P059H01P026B111R1_001.ab1   548 
  441    BE499309Td08P059H01P026B111F1_001.ab1   401 
  453  C BE499309Td08P059H01P026B111R1_001.ab1    96 
  493    BE499309Td08P059H01P026B111F1_001.ab1   453 
Contig length: old 584, new 585

Contig length: old 585, new 585
New start: 0