No. words: 1074; after pruning: 1048


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 2.2 (1,1:497)  476  0.00 0.20 0.20  BE499309Td09P059H01P026B111F1_016.ab1        4   498 (46)  C BE499309Td09P059H01P026B111R1_016.ab1   (35)   495     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE499309Td09P059H01P026B111R1_016.ab1   530 
  339    BE499309Td09P059H01P026B111F1_016.ab1   306 
  343  C BE499309Td09P059H01P026B111R1_016.ab1   188 
  435    BE499309Td09P059H01P026B111F1_016.ab1   402 
  447  C BE499309Td09P059H01P026B111R1_016.ab1    84 
  467    BE499309Td09P059H01P026B111F1_016.ab1   434 
  471  C BE499309Td09P059H01P026B111R1_016.ab1    60 
  487    BE499309Td09P059H01P026B111F1_016.ab1   454 
Contig length: old 576, new 577

Contig length: old 577, new 577
New start: 0