No. words: 1101; after pruning: 1075


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:389)  377  0.00 0.26 0.26  BE499982Ld01P067F06P067F121F1_080.ab1        1   390 (147)  C BE499982Ld01P067F06P067F121R1_080.ab1   (174)   390     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  190 nodes

 97 str. conn. components

Path
    1  C BE499982Ld01P067F06P067F121R1_080.ab1   564 
  449    BE499982Ld01P067F06P067F121F1_080.ab1   274 
  469  C BE499982Ld01P067F06P067F121R1_080.ab1    96 
  477    BE499982Ld01P067F06P067F121F1_080.ab1   302 
  505  C BE499982Ld01P067F06P067F121R1_080.ab1    60 
  509    BE499982Ld01P067F06P067F121F1_080.ab1   334 
Contig length: old 711, new 712

Contig length: old 712, new 712
New start: 0