No. words: 1679; after pruning: 1653


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:971)  678  0.00 0.14 0.14  BE499982Ld02P067F06P067F121F1_078.ab1      137   843 (0)  C BE499982Ld02P067F06P067F121R1_078.ab1   (0)   836   130 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1    BE499982Ld02P067F06P067F121F1_078.ab1     1 
  408  C BE499982Ld02P067F06P067F121R1_078.ab1   565 
  412    BE499982Ld02P067F06P067F121F1_078.ab1   412 
  428  C BE499982Ld02P067F06P067F121R1_078.ab1   545 
  432    BE499982Ld02P067F06P067F121F1_078.ab1   432 
  440  C BE499982Ld02P067F06P067F121R1_078.ab1   533 
  464    BE499982Ld02P067F06P067F121F1_078.ab1   464 
  472  C BE499982Ld02P067F06P067F121R1_078.ab1   501 
  484    BE499982Ld02P067F06P067F121F1_078.ab1   484 
  488  C BE499982Ld02P067F06P067F121R1_078.ab1   485 
Contig length: old 972, new 972

Contig length: old 972, new 972
New start: 0