No. words: 1310; after pruning: 1271


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.3 (1,1:280)  259  0.00 0.36 0.36  BE500083Ld10P016A06A12F1_034.scf        1   281 (149)  C BE500083Ld10P016A06A12R1_034.ab1   (169)   281     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    1
    2    1

Chimera merges: 


Contig 1:  136 nodes

 70 str. conn. components

Path
    1  C BE500083Ld10P016A06A12R1_034.ab1   450 
  184    BE500083Ld10P016A06A12F1_034.scf    14 
Contig length: old 599, new 600

Contig length: old 600, new 600
New start: 0