No. words: 475; after pruning: 449


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)   11   -4.3 -4.3 (1,1:196)  167  0.00 0.00 0.56  BE500083Sn30P059G02P059F121F1_084.ab1       12   191 (51)  C BE500083Sn30P059G02P059F121R1_084.ab1   (48)   185     7 *
  Worst pair: offset 1 
LLR breakdown: discreps: -1.0 (<20 part: -1.0 (#=1), >20:0.0 (#=0); in HQ: -1.0, out HQ 0.0), match: 4.0  trail: -0.8  lead: -6.5  total: -4.3  167  0.00 0.00 0.56  BE500083Sn30P059G02P059F121F1_084.ab1       12   191 (51)  C BE500083Sn30P059G02P059F121R1_084.ab1   (48)   185     7 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-4.3       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  88 nodes

 46 str. conn. components

Path
    1  C BE500083Sn30P059G02P059F121R1_084.ab1   233 
   80    BE500083Sn30P059G02P059F121F1_084.ab1    43 
   84  C BE500083Sn30P059G02P059F121R1_084.ab1   150 
  100    BE500083Sn30P059G02P059F121F1_084.ab1    63 
  156  C BE500083Sn30P059G02P059F121R1_084.ab1    78 
  168    BE500083Sn30P059G02P059F121F1_084.ab1   131 
Contig length: old 278, new 279

Contig length: old 279, new 279
New start: 0