No. words: 1270; after pruning: 1230


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:587)  577  0.17 0.00 0.00  BE500759As02P078C03P078C091F1_052.ab1        1   588 (45)  C BE500759As02P078C03P078C091R1_052.ab1   (49)   588     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE500759As02P078C03P078C091R1_052.ab1   637 
   57    BE500759As02P078C03P078C091F1_052.ab1     8 
  149  C BE500759As02P078C03P078C091R1_052.ab1   489 
  153    BE500759As02P078C03P078C091F1_052.ab1   104 
  273  C BE500759As02P078C03P078C091R1_052.ab1   365 
  277    BE500759As02P078C03P078C091F1_052.ab1   228 
  297  C BE500759As02P078C03P078C091R1_052.ab1   341 
  301    BE500759As02P078C03P078C091F1_052.ab1   252 
  309  C BE500759As02P078C03P078C091R1_052.ab1   329 
  313    BE500759As02P078C03P078C091F1_052.ab1   264 
  337  C BE500759As02P078C03P078C091R1_052.ab1   301 
  345    BE500759As02P078C03P078C091F1_052.ab1   296 
  353  C BE500759As02P078C03P078C091R1_052.ab1   285 
  365    BE500759As02P078C03P078C091F1_052.ab1   316 
  373  C BE500759As02P078C03P078C091R1_052.ab1   265 
  377    BE500759As02P078C03P078C091F1_052.ab1   328 
  425  C BE500759As02P078C03P078C091R1_052.ab1   213 
  490    BE500759As02P078C03P078C091F1_052.ab1   441 
  494  C BE500759As02P078C03P078C091R1_052.ab1   144 
  526    BE500759As02P078C03P078C091F1_052.ab1   477 
  534  C BE500759As02P078C03P078C091R1_052.ab1   104 
  566    BE500759As02P078C03P078C091F1_052.ab1   517 
  574  C BE500759As02P078C03P078C091R1_052.ab1    64 
  598    BE500759As02P078C03P078C091F1_052.ab1   549 
  606  C BE500759As02P078C03P078C091R1_052.ab1    32 
  630    BE500759As02P078C03P078C091F1_052.ab1   581 
Contig length: old 682, new 682

Contig length: old 682, new 682
New start: 0