No. words: 1230; after pruning: 1204


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:586)  574  0.17 0.00 0.00  BE500759Ld06P078C03P078C091F1_026.ab1        1   587 (29)  C BE500759Ld06P078C03P078C091R1_026.ab1   (27)   587     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE500759Ld06P078C03P078C091R1_026.ab1   614 
   39    BE500759Ld06P078C03P078C091F1_026.ab1    12 
   51  C BE500759Ld06P078C03P078C091R1_026.ab1   564 
   55    BE500759Ld06P078C03P078C091F1_026.ab1    28 
   63  C BE500759Ld06P078C03P078C091R1_026.ab1   552 
   75    BE500759Ld06P078C03P078C091F1_026.ab1    48 
  283  C BE500759Ld06P078C03P078C091R1_026.ab1   332 
  287    BE500759Ld06P078C03P078C091F1_026.ab1   260 
  315  C BE500759Ld06P078C03P078C091R1_026.ab1   300 
  323    BE500759Ld06P078C03P078C091F1_026.ab1   296 
  327  C BE500759Ld06P078C03P078C091R1_026.ab1   288 
  419    BE500759Ld06P078C03P078C091F1_026.ab1   392 
  423  C BE500759Ld06P078C03P078C091R1_026.ab1   192 
  551    BE500759Ld06P078C03P078C091F1_026.ab1   524 
  555  C BE500759Ld06P078C03P078C091R1_026.ab1    60 
  571    BE500759Ld06P078C03P078C091F1_026.ab1   544 
  592  C BE500759Ld06P078C03P078C091R1_026.ab1    23 
  596    BE500759Ld06P078C03P078C091F1_026.ab1   569 
  604  C BE500759Ld06P078C03P078C091R1_026.ab1    11 
  608    BE500759Ld06P078C03P078C091F1_026.ab1   581 
Contig length: old 643, new 643

Contig length: old 643, new 643
New start: 0