No. words: 1060; after pruning: 1034


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:477)  466  0.00 0.21 0.00  BE500759Sn28P095D08P078C091F1_086.ab1        1   478 (53)  C BE500759Sn28P095D08P078C091R1_086.ab1   (50)   479     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE500759Sn28P095D08P078C091R1_086.ab1   529 
  108    BE500759Sn28P095D08P078C091F1_086.ab1    57 
  112  C BE500759Sn28P095D08P078C091R1_086.ab1   418 
  140    BE500759Sn28P095D08P078C091F1_086.ab1    89 
  144  C BE500759Sn28P095D08P078C091R1_086.ab1   386 
  192    BE500759Sn28P095D08P078C091F1_086.ab1   141 
  216  C BE500759Sn28P095D08P078C091R1_086.ab1   314 
  224    BE500759Sn28P095D08P078C091F1_086.ab1   173 
  236  C BE500759Sn28P095D08P078C091R1_086.ab1   294 
  276    BE500759Sn28P095D08P078C091F1_086.ab1   225 
  304  C BE500759Sn28P095D08P078C091R1_086.ab1   226 
  332    BE500759Sn28P095D08P078C091F1_086.ab1   281 
  380  C BE500759Sn28P095D08P078C091R1_086.ab1   150 
  384    BE500759Sn28P095D08P078C091F1_086.ab1   333 
Contig length: old 582, new 582

Contig length: old 582, new 582
New start: 0