No. words: 1071; after pruning: 1045


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:487)  479  0.00 0.00 0.00  BE500759Sn31P095D08P078C091F1_078.ab1        1   488 (48)  C BE500759Sn31P095D08P078C091R1_078.ab1   (47)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BE500759Sn31P095D08P078C091R1_078.ab1   535 
  143    BE500759Sn31P095D08P078C091F1_078.ab1    96 
  147  C BE500759Sn31P095D08P078C091R1_078.ab1   389 
  163    BE500759Sn31P095D08P078C091F1_078.ab1   116 
  303  C BE500759Sn31P095D08P078C091R1_078.ab1   233 
  335    BE500759Sn31P095D08P078C091F1_078.ab1   288 
  359  C BE500759Sn31P095D08P078C091R1_078.ab1   177 
  363    BE500759Sn31P095D08P078C091F1_078.ab1   316 
  371  C BE500759Sn31P095D08P078C091R1_078.ab1   165 
  403    BE500759Sn31P095D08P078C091F1_078.ab1   356 
Contig length: old 583, new 583

Contig length: old 583, new 583
New start: 0