No. words: 596; after pruning: 570


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 3.5 (1,1:299)  215  3.28 0.00 0.00  BE500759Ta12P101H06P078C091F1_080.ab1        1   244 (1)  C BE500759Ta12P101H06P078C091R1_080.ab1   (51)   300    57 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  104 nodes

 54 str. conn. components

Path
    1  C BE500759Ta12P101H06P078C091R1_080.ab1   351 
Contig length: old 351, new 351

Contig length: old 351, new 351
New start: 0