No. words: 1000; after pruning: 974


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:459)  450  0.22 0.00 0.00  BE500759Ta20P078C03P095H081F1_062.ab1        1   460 (44)  C BE500759Ta20P078C03P095H081R1_062.ab1   (36)   460     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BE500759Ta20P078C03P095H081R1_062.ab1   496 
  232    BE500759Ta20P078C03P095H081F1_062.ab1   196 
  268  C BE500759Ta20P078C03P095H081R1_062.ab1   229 
  348    BE500759Ta20P078C03P095H081F1_062.ab1   312 
  372  C BE500759Ta20P078C03P095H081R1_062.ab1   125 
  380    BE500759Ta20P078C03P095H081F1_062.ab1   344 
  408  C BE500759Ta20P078C03P095H081R1_062.ab1    89 
  428    BE500759Ta20P078C03P095H081F1_062.ab1   392 
Contig length: old 540, new 540

Contig length: old 540, new 540
New start: 0