No. words: 1065; after pruning: 1039


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:479)  467  0.00 0.21 0.00  BE500759Ta24P095D08P078C091F1_090.ab1        1   480 (55)  C BE500759Ta24P095D08P078C091R1_090.ab1   (49)   481     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BE500759Ta24P095D08P078C091R1_090.ab1   530 
  139    BE500759Ta24P095D08P078C091F1_090.ab1    89 
  143  C BE500759Ta24P095D08P078C091R1_090.ab1   388 
  223    BE500759Ta24P095D08P078C091F1_090.ab1   173 
  271  C BE500759Ta24P095D08P078C091R1_090.ab1   260 
  275    BE500759Ta24P095D08P078C091F1_090.ab1   225 
  303  C BE500759Ta24P095D08P078C091R1_090.ab1   228 
  331    BE500759Ta24P095D08P078C091F1_090.ab1   281 
  439  C BE500759Ta24P095D08P078C091R1_090.ab1    92 
  443    BE500759Ta24P095D08P078C091F1_090.ab1   393 
  471  C BE500759Ta24P095D08P078C091R1_090.ab1    60 
  479    BE500759Ta24P095D08P078C091F1_090.ab1   429 
Contig length: old 585, new 585

Contig length: old 585, new 585
New start: 0