No. words: 989; after pruning: 963


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:449)  415  1.11 0.22 0.44  BE500759Td04P078C03P095H081F1_046.ab1        1   451 (38)  C BE500759Td04P078C03P095H081R1_046.ab1   (50)   450     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BE500759Td04P078C03P095H081R1_046.ab1   500 
  334    BE500759Td04P078C03P095H081F1_046.ab1   284 
  370  C BE500759Td04P078C03P095H081R1_046.ab1   131 
  374    BE500759Td04P078C03P095H081F1_046.ab1   324 
Contig length: old 539, new 539

Contig length: old 539, new 539
New start: 0