No. words: 1000; after pruning: 974


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:457)  441  0.44 0.22 0.00  BE500759Td07P078C03P095H081F1_041.ab1        1   458 (44)  C BE500759Td07P078C03P095H081R1_041.ab1   (39)   459     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BE500759Td07P078C03P095H081R1_041.ab1   498 
  230    BE500759Td07P078C03P095H081F1_041.ab1   190 
  246  C BE500759Td07P078C03P095H081R1_041.ab1   253 
  290    BE500759Td07P078C03P095H081F1_041.ab1   250 
  474  C BE500759Td07P078C03P095H081R1_041.ab1    25 
  478    BE500759Td07P078C03P095H081F1_041.ab1   438 
Contig length: old 542, new 542

Contig length: old 542, new 542
New start: 0