No. words: 1222; after pruning: 1196


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:546)  534  0.18 0.00 0.00  BE500759Tu01P078C03P078C091F1_058.ab1        1   547 (64)  C BE500759Tu01P078C03P078C091R1_058.ab1   (64)   547     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE500759Tu01P078C03P078C091R1_058.ab1   611 
   72    BE500759Tu01P078C03P078C091F1_058.ab1     8 
   76  C BE500759Tu01P078C03P078C091R1_058.ab1   536 
   84    BE500759Tu01P078C03P078C091F1_058.ab1    20 
   92  C BE500759Tu01P078C03P078C091R1_058.ab1   520 
  104    BE500759Tu01P078C03P078C091F1_058.ab1    40 
  128  C BE500759Tu01P078C03P078C091R1_058.ab1   484 
  136    BE500759Tu01P078C03P078C091F1_058.ab1    72 
  140  C BE500759Tu01P078C03P078C091R1_058.ab1   472 
  144    BE500759Tu01P078C03P078C091F1_058.ab1    80 
  156  C BE500759Tu01P078C03P078C091R1_058.ab1   456 
  160    BE500759Tu01P078C03P078C091F1_058.ab1    96 
  184  C BE500759Tu01P078C03P078C091R1_058.ab1   428 
  188    BE500759Tu01P078C03P078C091F1_058.ab1   124 
  200  C BE500759Tu01P078C03P078C091R1_058.ab1   412 
  212    BE500759Tu01P078C03P078C091F1_058.ab1   148 
  220  C BE500759Tu01P078C03P078C091R1_058.ab1   392 
  224    BE500759Tu01P078C03P078C091F1_058.ab1   160 
  236  C BE500759Tu01P078C03P078C091R1_058.ab1   376 
  240    BE500759Tu01P078C03P078C091F1_058.ab1   176 
  244  C BE500759Tu01P078C03P078C091R1_058.ab1   368 
  252    BE500759Tu01P078C03P078C091F1_058.ab1   188 
  268  C BE500759Tu01P078C03P078C091R1_058.ab1   344 
  284    BE500759Tu01P078C03P078C091F1_058.ab1   220 
  296  C BE500759Tu01P078C03P078C091R1_058.ab1   316 
  308    BE500759Tu01P078C03P078C091F1_058.ab1   244 
  340  C BE500759Tu01P078C03P078C091R1_058.ab1   272 
  356    BE500759Tu01P078C03P078C091F1_058.ab1   292 
  396  C BE500759Tu01P078C03P078C091R1_058.ab1   216 
  408    BE500759Tu01P078C03P078C091F1_058.ab1   344 
  440  C BE500759Tu01P078C03P078C091R1_058.ab1   172 
  448    BE500759Tu01P078C03P078C091F1_058.ab1   384 
  460  C BE500759Tu01P078C03P078C091R1_058.ab1   152 
  468    BE500759Tu01P078C03P078C091F1_058.ab1   404 
  476  C BE500759Tu01P078C03P078C091R1_058.ab1   136 
  480    BE500759Tu01P078C03P078C091F1_058.ab1   416 
  534  C BE500759Tu01P078C03P078C091R1_058.ab1    78 
  538    BE500759Tu01P078C03P078C091F1_058.ab1   474 
  542  C BE500759Tu01P078C03P078C091R1_058.ab1    70 
  546    BE500759Tu01P078C03P078C091F1_058.ab1   482 
Contig length: old 675, new 675

Contig length: old 675, new 675
New start: 0