No. words: 1246; after pruning: 1220


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.7 (1,1:571)  561  0.00 0.00 0.00  BE500759Tu02P078C03P078C091F1_056.ab1        1   572 (51)  C BE500759Tu02P078C03P078C091R1_056.ab1   (51)   572     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C BE500759Tu02P078C03P078C091R1_056.ab1   623 
   59    BE500759Tu02P078C03P078C091F1_056.ab1     8 
   67  C BE500759Tu02P078C03P078C091R1_056.ab1   557 
   83    BE500759Tu02P078C03P078C091F1_056.ab1    32 
   87  C BE500759Tu02P078C03P078C091R1_056.ab1   537 
   99    BE500759Tu02P078C03P078C091F1_056.ab1    48 
  107  C BE500759Tu02P078C03P078C091R1_056.ab1   517 
  111    BE500759Tu02P078C03P078C091F1_056.ab1    60 
  119  C BE500759Tu02P078C03P078C091R1_056.ab1   505 
  131    BE500759Tu02P078C03P078C091F1_056.ab1    80 
  135  C BE500759Tu02P078C03P078C091R1_056.ab1   489 
  143    BE500759Tu02P078C03P078C091F1_056.ab1    92 
  155  C BE500759Tu02P078C03P078C091R1_056.ab1   469 
  159    BE500759Tu02P078C03P078C091F1_056.ab1   108 
  163  C BE500759Tu02P078C03P078C091R1_056.ab1   461 
  171    BE500759Tu02P078C03P078C091F1_056.ab1   120 
  231  C BE500759Tu02P078C03P078C091R1_056.ab1   393 
  255    BE500759Tu02P078C03P078C091F1_056.ab1   204 
  267  C BE500759Tu02P078C03P078C091R1_056.ab1   357 
  271    BE500759Tu02P078C03P078C091F1_056.ab1   220 
  287  C BE500759Tu02P078C03P078C091R1_056.ab1   337 
  291    BE500759Tu02P078C03P078C091F1_056.ab1   240 
  299  C BE500759Tu02P078C03P078C091R1_056.ab1   325 
  307    BE500759Tu02P078C03P078C091F1_056.ab1   256 
  331  C BE500759Tu02P078C03P078C091R1_056.ab1   293 
  335    BE500759Tu02P078C03P078C091F1_056.ab1   284 
  399  C BE500759Tu02P078C03P078C091R1_056.ab1   225 
  419    BE500759Tu02P078C03P078C091F1_056.ab1   368 
  471  C BE500759Tu02P078C03P078C091R1_056.ab1   153 
  475    BE500759Tu02P078C03P078C091F1_056.ab1   424 
  479  C BE500759Tu02P078C03P078C091R1_056.ab1   145 
  483    BE500759Tu02P078C03P078C091F1_056.ab1   432 
  531  C BE500759Tu02P078C03P078C091R1_056.ab1    93 
  539    BE500759Tu02P078C03P078C091F1_056.ab1   488 
Contig length: old 674, new 674

Contig length: old 674, new 674
New start: 0