No. words: 1233; after pruning: 1207


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:716)  506  0.00 0.00 0.00  BE517709Ld03P067E04P067E101F1_057.ab1       95   610 (0)  C BE517709Ld03P067E04P067E101R1_057.ab1   (0)   623   108 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1    BE517709Ld03P067E04P067E101F1_057.ab1     1 
  366  C BE517709Ld03P067E04P067E101R1_057.ab1   352 
  438    BE517709Ld03P067E04P067E101F1_057.ab1   438 
  466  C BE517709Ld03P067E04P067E101R1_057.ab1   252 
Contig length: old 717, new 717

Contig length: old 717, new 717
New start: 0