No. words: 1280; after pruning: 1254


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.7 (1,1:648)  573  0.34 0.00 0.00  BE517709Ld04P067E04P067E101F1_055.ab1        1   592 (0)  C BE517709Ld04P067E04P067E101R1_055.ab1   (39)   649    58 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE517709Ld04P067E04P067E101R1_055.ab1   688 
   43    BE517709Ld04P067E04P067E101F1_055.ab1     4 
   63  C BE517709Ld04P067E04P067E101R1_055.ab1   626 
   82    BE517709Ld04P067E04P067E101F1_055.ab1    43 
  254  C BE517709Ld04P067E04P067E101R1_055.ab1   435 
  258    BE517709Ld04P067E04P067E101F1_055.ab1   219 
  358  C BE517709Ld04P067E04P067E101R1_055.ab1   331 
  442    BE517709Ld04P067E04P067E101F1_055.ab1   403 
  522  C BE517709Ld04P067E04P067E101R1_055.ab1   167 
Contig length: old 688, new 688

Contig length: old 688, new 688
New start: 0