No. words: 1374; after pruning: 1348


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 12.1 (1,1:702)  634  0.60 0.15 0.15  BE517709Ld08P067E04P067E101F1_064.ab1       16   685 (0)  C BE517709Ld08P067E04P067E101R1_064.ab1   (1)   688    19 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1    BE517709Ld08P067E04P067E101F1_064.ab1     1 
  374  C BE517709Ld08P067E04P067E101R1_064.ab1   330 
  394    BE517709Ld08P067E04P067E101F1_064.ab1   394 
  410  C BE517709Ld08P067E04P067E101R1_064.ab1   294 
  438    BE517709Ld08P067E04P067E101F1_064.ab1   438 
  506  C BE517709Ld08P067E04P067E101R1_064.ab1   198 
  518    BE517709Ld08P067E04P067E101F1_064.ab1   518 
  526  C BE517709Ld08P067E04P067E101R1_064.ab1   178 
  534    BE517709Ld08P067E04P067E101F1_064.ab1   534 
  542  C BE517709Ld08P067E04P067E101R1_064.ab1   162 
  606    BE517709Ld08P067E04P067E101F1_064.ab1   606 
  610  C BE517709Ld08P067E04P067E101R1_064.ab1    94 
  618    BE517709Ld08P067E04P067E101F1_064.ab1   618 
  630  C BE517709Ld08P067E04P067E101R1_064.ab1    74 
Contig length: old 703, new 703

Contig length: old 703, new 703
New start: 0 
S Change at: 669; seg lengths: entry 1, contig 1