No. words: 1230; after pruning: 1204


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.8 (1,1:574)  560  0.00 0.00 0.00  BE517709Sn25P101C07P067E101F1_023.ab1        1   575 (36)  C BE517709Sn25P101C07P067E101R1_023.ab1   (44)   575     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C BE517709Sn25P101C07P067E101R1_023.ab1   619 
   92    BE517709Sn25P101C07P067E101F1_023.ab1    48 
  100  C BE517709Sn25P101C07P067E101R1_023.ab1   520 
  136    BE517709Sn25P101C07P067E101F1_023.ab1    92 
  140  C BE517709Sn25P101C07P067E101R1_023.ab1   480 
  172    BE517709Sn25P101C07P067E101F1_023.ab1   128 
  180  C BE517709Sn25P101C07P067E101R1_023.ab1   440 
  196    BE517709Sn25P101C07P067E101F1_023.ab1   152 
  200  C BE517709Sn25P101C07P067E101R1_023.ab1   420 
  220    BE517709Sn25P101C07P067E101F1_023.ab1   176 
  248  C BE517709Sn25P101C07P067E101R1_023.ab1   372 
  256    BE517709Sn25P101C07P067E101F1_023.ab1   212 
  280  C BE517709Sn25P101C07P067E101R1_023.ab1   340 
  304    BE517709Sn25P101C07P067E101F1_023.ab1   260 
  308  C BE517709Sn25P101C07P067E101R1_023.ab1   312 
  316    BE517709Sn25P101C07P067E101F1_023.ab1   272 
  320  C BE517709Sn25P101C07P067E101R1_023.ab1   300 
  332    BE517709Sn25P101C07P067E101F1_023.ab1   288 
  380  C BE517709Sn25P101C07P067E101R1_023.ab1   240 
  388    BE517709Sn25P101C07P067E101F1_023.ab1   344 
  396  C BE517709Sn25P101C07P067E101R1_023.ab1   224 
  404    BE517709Sn25P101C07P067E101F1_023.ab1   360 
  420  C BE517709Sn25P101C07P067E101R1_023.ab1   200 
  424    BE517709Sn25P101C07P067E101F1_023.ab1   380 
  456  C BE517709Sn25P101C07P067E101R1_023.ab1   164 
  468    BE517709Sn25P101C07P067E101F1_023.ab1   424 
  540  C BE517709Sn25P101C07P067E101R1_023.ab1    80 
  548    BE517709Sn25P101C07P067E101F1_023.ab1   504 
Contig length: old 655, new 655

Contig length: old 655, new 655
New start: 0