No. words: 1313; after pruning: 1287


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:594)  570  0.17 0.00 0.17  BE517709Sn26P101E07P067E101F1_046.ab1        1   595 (57)  C BE517709Sn26P101E07P067E101R1_046.ab1   (67)   594     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE517709Sn26P101E07P067E101R1_046.ab1   661 
  164    BE517709Sn26P101E07P067E101F1_046.ab1    97 
  168  C BE517709Sn26P101E07P067E101R1_046.ab1   494 
  212    BE517709Sn26P101E07P067E101F1_046.ab1   145 
  220  C BE517709Sn26P101E07P067E101R1_046.ab1   442 
  240    BE517709Sn26P101E07P067E101F1_046.ab1   173 
  248  C BE517709Sn26P101E07P067E101R1_046.ab1   414 
  276    BE517709Sn26P101E07P067E101F1_046.ab1   209 
  296  C BE517709Sn26P101E07P067E101R1_046.ab1   366 
  308    BE517709Sn26P101E07P067E101F1_046.ab1   241 
  332  C BE517709Sn26P101E07P067E101R1_046.ab1   330 
  352    BE517709Sn26P101E07P067E101F1_046.ab1   285 
  360  C BE517709Sn26P101E07P067E101R1_046.ab1   302 
  368    BE517709Sn26P101E07P067E101F1_046.ab1   301 
  384  C BE517709Sn26P101E07P067E101R1_046.ab1   278 
  400    BE517709Sn26P101E07P067E101F1_046.ab1   333 
  428  C BE517709Sn26P101E07P067E101R1_046.ab1   234 
  432    BE517709Sn26P101E07P067E101F1_046.ab1   365 
  460  C BE517709Sn26P101E07P067E101R1_046.ab1   202 
  464    BE517709Sn26P101E07P067E101F1_046.ab1   397 
  472  C BE517709Sn26P101E07P067E101R1_046.ab1   190 
  492    BE517709Sn26P101E07P067E101F1_046.ab1   425 
  500  C BE517709Sn26P101E07P067E101R1_046.ab1   162 
  516    BE517709Sn26P101E07P067E101F1_046.ab1   449 
  564  C BE517709Sn26P101E07P067E101R1_046.ab1    98 
  568    BE517709Sn26P101E07P067E101F1_046.ab1   501 
  572  C BE517709Sn26P101E07P067E101R1_046.ab1    90 
  580    BE517709Sn26P101E07P067E101F1_046.ab1   513 
Contig length: old 718, new 719

Contig length: old 719, new 719
New start: 0