No. words: 1224; after pruning: 1198


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:561)  546  0.00 0.00 0.00  BE517709Sn28P101C07P067E101F1_022.ab1        1   562 (51)  C BE517709Sn28P101C07P067E101R1_022.ab1   (49)   562     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BE517709Sn28P101C07P067E101R1_022.ab1   611 
   73    BE517709Sn28P101C07P067E101F1_022.ab1    24 
   77  C BE517709Sn28P101C07P067E101R1_022.ab1   535 
   93    BE517709Sn28P101C07P067E101F1_022.ab1    44 
  113  C BE517709Sn28P101C07P067E101R1_022.ab1   499 
  141    BE517709Sn28P101C07P067E101F1_022.ab1    92 
  153  C BE517709Sn28P101C07P067E101R1_022.ab1   459 
  177    BE517709Sn28P101C07P067E101F1_022.ab1   128 
  185  C BE517709Sn28P101C07P067E101R1_022.ab1   427 
  201    BE517709Sn28P101C07P067E101F1_022.ab1   152 
  205  C BE517709Sn28P101C07P067E101R1_022.ab1   407 
  217    BE517709Sn28P101C07P067E101F1_022.ab1   168 
  221  C BE517709Sn28P101C07P067E101R1_022.ab1   391 
  225    BE517709Sn28P101C07P067E101F1_022.ab1   176 
  241  C BE517709Sn28P101C07P067E101R1_022.ab1   371 
  249    BE517709Sn28P101C07P067E101F1_022.ab1   200 
  289  C BE517709Sn28P101C07P067E101R1_022.ab1   323 
  301    BE517709Sn28P101C07P067E101F1_022.ab1   252 
  313  C BE517709Sn28P101C07P067E101R1_022.ab1   299 
  321    BE517709Sn28P101C07P067E101F1_022.ab1   272 
  345  C BE517709Sn28P101C07P067E101R1_022.ab1   267 
  353    BE517709Sn28P101C07P067E101F1_022.ab1   304 
  401  C BE517709Sn28P101C07P067E101R1_022.ab1   211 
  405    BE517709Sn28P101C07P067E101F1_022.ab1   356 
  425  C BE517709Sn28P101C07P067E101R1_022.ab1   187 
  429    BE517709Sn28P101C07P067E101F1_022.ab1   380 
  465  C BE517709Sn28P101C07P067E101R1_022.ab1   147 
  473    BE517709Sn28P101C07P067E101F1_022.ab1   424 
  545  C BE517709Sn28P101C07P067E101R1_022.ab1    67 
  553    BE517709Sn28P101C07P067E101F1_022.ab1   504 
Contig length: old 662, new 662

Contig length: old 662, new 662
New start: 0