No. words: 1357; after pruning: 1331


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:592)  562  1.18 0.00 0.00  BE517709Sn30P067E04P101F071F1_020.ab1        1   593 (112)  C BE517709Sn30P067E04P101F071R1_020.ab1   (59)   593     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BE517709Sn30P067E04P101F071R1_020.ab1   652 
   87    BE517709Sn30P067E04P101F071F1_020.ab1    28 
   91  C BE517709Sn30P067E04P101F071R1_020.ab1   562 
  115    BE517709Sn30P067E04P101F071F1_020.ab1    56 
  123  C BE517709Sn30P067E04P101F071R1_020.ab1   530 
  139    BE517709Sn30P067E04P101F071F1_020.ab1    80 
  143  C BE517709Sn30P067E04P101F071R1_020.ab1   510 
  175    BE517709Sn30P067E04P101F071F1_020.ab1   116 
  183  C BE517709Sn30P067E04P101F071R1_020.ab1   470 
  203    BE517709Sn30P067E04P101F071F1_020.ab1   144 
  211  C BE517709Sn30P067E04P101F071R1_020.ab1   442 
  215    BE517709Sn30P067E04P101F071F1_020.ab1   156 
  227  C BE517709Sn30P067E04P101F071R1_020.ab1   426 
  239    BE517709Sn30P067E04P101F071F1_020.ab1   180 
  247  C BE517709Sn30P067E04P101F071R1_020.ab1   406 
  283    BE517709Sn30P067E04P101F071F1_020.ab1   224 
  311  C BE517709Sn30P067E04P101F071R1_020.ab1   342 
  331    BE517709Sn30P067E04P101F071F1_020.ab1   272 
  347  C BE517709Sn30P067E04P101F071R1_020.ab1   306 
  363    BE517709Sn30P067E04P101F071F1_020.ab1   304 
  385  C BE517709Sn30P067E04P101F071R1_020.ab1   268 
  393    BE517709Sn30P067E04P101F071F1_020.ab1   334 
  397  C BE517709Sn30P067E04P101F071R1_020.ab1   256 
  409    BE517709Sn30P067E04P101F071F1_020.ab1   350 
  437  C BE517709Sn30P067E04P101F071R1_020.ab1   216 
  441    BE517709Sn30P067E04P101F071F1_020.ab1   382 
Contig length: old 764, new 764

Contig length: old 764, new 764
New start: 0