No. words: 1230; after pruning: 1204


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:564)  548  0.00 0.00 0.00  BE517709Sn30P101C07P067E101F1_020.ab1        1   565 (52)  C BE517709Sn30P101C07P067E101R1_020.ab1   (48)   565     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BE517709Sn30P101C07P067E101R1_020.ab1   613 
   76    BE517709Sn30P101C07P067E101F1_020.ab1    28 
   84  C BE517709Sn30P101C07P067E101R1_020.ab1   530 
  100    BE517709Sn30P101C07P067E101F1_020.ab1    52 
  108  C BE517709Sn30P101C07P067E101R1_020.ab1   506 
  144    BE517709Sn30P101C07P067E101F1_020.ab1    96 
  148  C BE517709Sn30P101C07P067E101R1_020.ab1   466 
  180    BE517709Sn30P101C07P067E101F1_020.ab1   132 
  184  C BE517709Sn30P101C07P067E101R1_020.ab1   430 
  204    BE517709Sn30P101C07P067E101F1_020.ab1   156 
  208  C BE517709Sn30P101C07P067E101R1_020.ab1   406 
  216    BE517709Sn30P101C07P067E101F1_020.ab1   168 
  224  C BE517709Sn30P101C07P067E101R1_020.ab1   390 
  228    BE517709Sn30P101C07P067E101F1_020.ab1   180 
  244  C BE517709Sn30P101C07P067E101R1_020.ab1   370 
  252    BE517709Sn30P101C07P067E101F1_020.ab1   204 
  260  C BE517709Sn30P101C07P067E101R1_020.ab1   354 
  272    BE517709Sn30P101C07P067E101F1_020.ab1   224 
  288  C BE517709Sn30P101C07P067E101R1_020.ab1   326 
  320    BE517709Sn30P101C07P067E101F1_020.ab1   272 
  404  C BE517709Sn30P101C07P067E101R1_020.ab1   210 
  408    BE517709Sn30P101C07P067E101F1_020.ab1   360 
  420  C BE517709Sn30P101C07P067E101R1_020.ab1   194 
  424    BE517709Sn30P101C07P067E101F1_020.ab1   376 
  428  C BE517709Sn30P101C07P067E101R1_020.ab1   186 
  432    BE517709Sn30P101C07P067E101F1_020.ab1   384 
  444  C BE517709Sn30P101C07P067E101R1_020.ab1   170 
  452    BE517709Sn30P101C07P067E101F1_020.ab1   404 
  468  C BE517709Sn30P101C07P067E101R1_020.ab1   146 
  472    BE517709Sn30P101C07P067E101F1_020.ab1   424 
Contig length: old 665, new 665

Contig length: old 665, new 665
New start: 0