No. words: 1339; after pruning: 1313


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:580)  535  1.89 0.17 0.00  BE517709Ta11P067E04P101F071F1_005.ab1        1   581 (115)  C BE517709Ta11P067E04P101F071R1_005.ab1   (61)   582     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C BE517709Ta11P067E04P101F071R1_005.ab1   643 
  128    BE517709Ta11P067E04P101F071F1_005.ab1    66 
  132  C BE517709Ta11P067E04P101F071R1_005.ab1   512 
  148    BE517709Ta11P067E04P101F071F1_005.ab1    86 
  152  C BE517709Ta11P067E04P101F071R1_005.ab1   492 
  200    BE517709Ta11P067E04P101F071F1_005.ab1   138 
  208  C BE517709Ta11P067E04P101F071R1_005.ab1   436 
  228    BE517709Ta11P067E04P101F071F1_005.ab1   166 
  232  C BE517709Ta11P067E04P101F071R1_005.ab1   412 
  264    BE517709Ta11P067E04P101F071F1_005.ab1   202 
  268  C BE517709Ta11P067E04P101F071R1_005.ab1   376 
  276    BE517709Ta11P067E04P101F071F1_005.ab1   214 
  280  C BE517709Ta11P067E04P101F071R1_005.ab1   364 
  284    BE517709Ta11P067E04P101F071F1_005.ab1   222 
  288  C BE517709Ta11P067E04P101F071R1_005.ab1   356 
  296    BE517709Ta11P067E04P101F071F1_005.ab1   234 
  300  C BE517709Ta11P067E04P101F071R1_005.ab1   344 
  304    BE517709Ta11P067E04P101F071F1_005.ab1   242 
  308  C BE517709Ta11P067E04P101F071R1_005.ab1   336 
  328    BE517709Ta11P067E04P101F071F1_005.ab1   266 
  332  C BE517709Ta11P067E04P101F071R1_005.ab1   312 
  344    BE517709Ta11P067E04P101F071F1_005.ab1   282 
  356  C BE517709Ta11P067E04P101F071R1_005.ab1   288 
  360    BE517709Ta11P067E04P101F071F1_005.ab1   298 
  372  C BE517709Ta11P067E04P101F071R1_005.ab1   272 
  376    BE517709Ta11P067E04P101F071F1_005.ab1   314 
  388  C BE517709Ta11P067E04P101F071R1_005.ab1   256 
  416    BE517709Ta11P067E04P101F071F1_005.ab1   354 
  432  C BE517709Ta11P067E04P101F071R1_005.ab1   212 
  440    BE517709Ta11P067E04P101F071F1_005.ab1   378 
  484  C BE517709Ta11P067E04P101F071R1_005.ab1   160 
  492    BE517709Ta11P067E04P101F071F1_005.ab1   430 
  540  C BE517709Ta11P067E04P101F071R1_005.ab1   104 
  550    BE517709Ta11P067E04P101F071F1_005.ab1   488 
  554  C BE517709Ta11P067E04P101F071R1_005.ab1    90 
  566    BE517709Ta11P067E04P101F071F1_005.ab1   504 
Contig length: old 758, new 758

Contig length: old 758, new 758
New start: 0