No. words: 1386; after pruning: 1360


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:645)  604  1.24 0.00 0.15  BE517709Ta12P067E04P101F071F1_006.ab1        1   646 (47)  C BE517709Ta12P067E04P101F071R1_006.ab1   (48)   645     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BE517709Ta12P067E04P101F071R1_006.ab1   693 
   72    BE517709Ta12P067E04P101F071F1_006.ab1    24 
   76  C BE517709Ta12P067E04P101F071R1_006.ab1   618 
  143    BE517709Ta12P067E04P101F071F1_006.ab1    95 
  151  C BE517709Ta12P067E04P101F071R1_006.ab1   543 
  211    BE517709Ta12P067E04P101F071F1_006.ab1   163 
  235  C BE517709Ta12P067E04P101F071R1_006.ab1   459 
  247    BE517709Ta12P067E04P101F071F1_006.ab1   199 
  303  C BE517709Ta12P067E04P101F071R1_006.ab1   391 
  339    BE517709Ta12P067E04P101F071F1_006.ab1   291 
  355  C BE517709Ta12P067E04P101F071R1_006.ab1   339 
  367    BE517709Ta12P067E04P101F071F1_006.ab1   319 
  387  C BE517709Ta12P067E04P101F071R1_006.ab1   307 
  408    BE517709Ta12P067E04P101F071F1_006.ab1   360 
  412  C BE517709Ta12P067E04P101F071R1_006.ab1   282 
  420    BE517709Ta12P067E04P101F071F1_006.ab1   372 
  456  C BE517709Ta12P067E04P101F071R1_006.ab1   238 
  476    BE517709Ta12P067E04P101F071F1_006.ab1   428 
Contig length: old 740, new 741

Contig length: old 741, new 741
New start: 0