No. words: 1225; after pruning: 1199


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:568)  548  0.00 0.00 0.18  BE517709Ta14P101C07P067E101F1_004.ab1        1   569 (42)  C BE517709Ta14P101C07P067E101R1_004.ab1   (46)   568     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BE517709Ta14P101C07P067E101R1_004.ab1   614 
  176    BE517709Ta14P101C07P067E101F1_004.ab1   131 
  180  C BE517709Ta14P101C07P067E101R1_004.ab1   435 
  404    BE517709Ta14P101C07P067E101F1_004.ab1   359 
  420  C BE517709Ta14P101C07P067E101R1_004.ab1   195 
  512    BE517709Ta14P101C07P067E101F1_004.ab1   467 
  544  C BE517709Ta14P101C07P067E101R1_004.ab1    71 
  548    BE517709Ta14P101C07P067E101F1_004.ab1   503 
Contig length: old 656, new 656

Contig length: old 656, new 656
New start: 0