No. words: 1103; after pruning: 1077


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
 -409  -361  0 331    137     E -136- 0
Fail: (1)  137    0.0 2.7 (1,1:361)  213  0.89 0.00 0.00  BE517709Ta16P067E04P101F071F1_002.ab1        1   225 (468)  C BE517709Ta16P067E04P101F071R1_002.ab1   (48)   362   138 *

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       0        1

Gap   # merges  # failures
 size
137       0        1

Offset
  0       1 

Pass 4
             Gap  Score    
 -409  -361  0 331    137     E -136- 0
Fail: (1)  137    0.0 2.7 (1,1:361)  213  0.89 0.00 0.00  BE517709Ta16P067E04P101F071F1_002.ab1        1   225 (468)  C BE517709Ta16P067E04P101F071R1_002.ab1   (48)   362   138 *

Pass: 4
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       0        1

Gap   # merges  # failures
 size
137       0        1

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 2:  2 nodes

 2 str. conn. components

Path
    1    BE517709Ta16P067E04P101F071R1_002.ab1     1 
Contig length: old 410, new 410

Contig 1:  2 nodes

 2 str. conn. components

Path
    1    BE517709Ta16P067E04P101F071F1_002.ab1     1 
Contig length: old 693, new 693