No. words: 1304; after pruning: 1278


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:603)  587  0.00 0.00 0.00  BE517709Ta16P101E07P067E101F1_092.ab1        1   604 (48)  C BE517709Ta16P101E07P067E101R1_092.ab1   (48)   604     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE517709Ta16P101E07P067E101R1_092.ab1   652 
  216    BE517709Ta16P101E07P067E101F1_092.ab1   168 
  248  C BE517709Ta16P101E07P067E101R1_092.ab1   405 
  288    BE517709Ta16P101E07P067E101F1_092.ab1   240 
  348  C BE517709Ta16P101E07P067E101R1_092.ab1   305 
  432    BE517709Ta16P101E07P067E101F1_092.ab1   384 
Contig length: old 700, new 700

Contig length: old 700, new 700
New start: 0