No. words: 1299; after pruning: 1273


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:547)  529  0.55 0.00 0.00  BE517709Ta17P067E04P101F071F1_031.ab1        1   548 (111)  C BE517709Ta17P067E04P101F071R1_031.ab1   (92)   548     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C BE517709Ta17P067E04P101F071R1_031.ab1   640 
  140    BE517709Ta17P067E04P101F071F1_031.ab1    48 
  144  C BE517709Ta17P067E04P101F071R1_031.ab1   497 
  176    BE517709Ta17P067E04P101F071F1_031.ab1    84 
  184  C BE517709Ta17P067E04P101F071R1_031.ab1   457 
  200    BE517709Ta17P067E04P101F071F1_031.ab1   108 
  204  C BE517709Ta17P067E04P101F071R1_031.ab1   437 
  268    BE517709Ta17P067E04P101F071F1_031.ab1   176 
  272  C BE517709Ta17P067E04P101F071R1_031.ab1   369 
  284    BE517709Ta17P067E04P101F071F1_031.ab1   192 
  300  C BE517709Ta17P067E04P101F071R1_031.ab1   341 
  316    BE517709Ta17P067E04P101F071F1_031.ab1   224 
  324  C BE517709Ta17P067E04P101F071R1_031.ab1   317 
  328    BE517709Ta17P067E04P101F071F1_031.ab1   236 
  332  C BE517709Ta17P067E04P101F071R1_031.ab1   309 
  340    BE517709Ta17P067E04P101F071F1_031.ab1   248 
  344  C BE517709Ta17P067E04P101F071R1_031.ab1   297 
  352    BE517709Ta17P067E04P101F071F1_031.ab1   260 
  384  C BE517709Ta17P067E04P101F071R1_031.ab1   257 
  388    BE517709Ta17P067E04P101F071F1_031.ab1   296 
  408  C BE517709Ta17P067E04P101F071R1_031.ab1   233 
  421    BE517709Ta17P067E04P101F071F1_031.ab1   329 
  425  C BE517709Ta17P067E04P101F071R1_031.ab1   216 
  441    BE517709Ta17P067E04P101F071F1_031.ab1   349 
  453  C BE517709Ta17P067E04P101F071R1_031.ab1   188 
  461    BE517709Ta17P067E04P101F071F1_031.ab1   369 
  481  C BE517709Ta17P067E04P101F071R1_031.ab1   160 
  489    BE517709Ta17P067E04P101F071F1_031.ab1   397 
  493  C BE517709Ta17P067E04P101F071R1_031.ab1   148 
  501    BE517709Ta17P067E04P101F071F1_031.ab1   409 
  533  C BE517709Ta17P067E04P101F071R1_031.ab1   108 
  541    BE517709Ta17P067E04P101F071F1_031.ab1   449 
  565  C BE517709Ta17P067E04P101F071R1_031.ab1    76 
  573    BE517709Ta17P067E04P101F071F1_031.ab1   481 
Contig length: old 751, new 751

Contig length: old 751, new 751
New start: 0