No. words: 1311; after pruning: 1285


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:609)  593  0.00 0.00 0.00  BE517709Ta18P101E07P067E101F1_090.ab1        1   610 (49)  C BE517709Ta18P101E07P067E101R1_090.ab1   (42)   610     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BE517709Ta18P101E07P067E101R1_090.ab1   652 
  218    BE517709Ta18P101E07P067E101F1_090.ab1   176 
  226  C BE517709Ta18P101E07P067E101R1_090.ab1   427 
  238    BE517709Ta18P101E07P067E101F1_090.ab1   196 
  250  C BE517709Ta18P101E07P067E101R1_090.ab1   403 
  310    BE517709Ta18P101E07P067E101F1_090.ab1   268 
Contig length: old 701, new 701

Contig length: old 701, new 701
New start: 0