No. words: 1392; after pruning: 1366


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 11.4 (1,1:651)  623  0.62 0.00 0.00  BE517709Ta19P067E04P101F071F1_029.ab1        5   652 (45)  C BE517709Ta19P067E04P101F071R1_029.ab1   (47)   648     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BE517709Ta19P067E04P101F071R1_029.ab1   695 
  287    BE517709Ta19P067E04P101F071F1_029.ab1   244 
  303  C BE517709Ta19P067E04P101F071R1_029.ab1   393 
  339    BE517709Ta19P067E04P101F071F1_029.ab1   296 
  347  C BE517709Ta19P067E04P101F071R1_029.ab1   349 
  355    BE517709Ta19P067E04P101F071F1_029.ab1   312 
  367  C BE517709Ta19P067E04P101F071R1_029.ab1   329 
  371    BE517709Ta19P067E04P101F071F1_029.ab1   328 
  387  C BE517709Ta19P067E04P101F071R1_029.ab1   309 
  407    BE517709Ta19P067E04P101F071F1_029.ab1   364 
  555  C BE517709Ta19P067E04P101F071R1_029.ab1   141 
  563    BE517709Ta19P067E04P101F071F1_029.ab1   520 
Contig length: old 740, new 740

Contig length: old 740, new 740
New start: 0