No. words: 1220; after pruning: 1194


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:560)  541  0.18 0.00 0.00  BE517709Ta19P101C07P067E101F1_029.ab1        1   561 (52)  C BE517709Ta19P101C07P067E101R1_029.ab1   (46)   561     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C BE517709Ta19P101C07P067E101R1_029.ab1   607 
  173    BE517709Ta19P101C07P067E101F1_029.ab1   127 
  177  C BE517709Ta19P101C07P067E101R1_029.ab1   431 
  337    BE517709Ta19P101C07P067E101F1_029.ab1   291 
  397  C BE517709Ta19P101C07P067E101R1_029.ab1   211 
  405    BE517709Ta19P101C07P067E101F1_029.ab1   359 
  413  C BE517709Ta19P101C07P067E101R1_029.ab1   195 
  469    BE517709Ta19P101C07P067E101F1_029.ab1   423 
  477  C BE517709Ta19P101C07P067E101R1_029.ab1   131 
  485    BE517709Ta19P101C07P067E101F1_029.ab1   439 
  497  C BE517709Ta19P101C07P067E101R1_029.ab1   111 
  505    BE517709Ta19P101C07P067E101F1_029.ab1   459 
  509  C BE517709Ta19P101C07P067E101R1_029.ab1    99 
  513    BE517709Ta19P101C07P067E101F1_029.ab1   467 
  521  C BE517709Ta19P101C07P067E101R1_029.ab1    87 
  525    BE517709Ta19P101C07P067E101F1_029.ab1   479 
  541  C BE517709Ta19P101C07P067E101R1_029.ab1    67 
  549    BE517709Ta19P101C07P067E101F1_029.ab1   503 
Contig length: old 659, new 659

Contig length: old 659, new 659
New start: 0