No. words: 1241; after pruning: 1215


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.5 (1,1:581)  565  0.00 0.00 0.00  BE517709Ta22P101C07P067E101F1_028.ab1        3   582 (36)  C BE517709Ta22P101C07P067E101R1_028.ab1   (43)   580     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE517709Ta22P101C07P067E101R1_028.ab1   623 
  155    BE517709Ta22P101C07P067E101F1_028.ab1   114 
  159  C BE517709Ta22P101C07P067E101R1_028.ab1   465 
  175    BE517709Ta22P101C07P067E101F1_028.ab1   134 
  183  C BE517709Ta22P101C07P067E101R1_028.ab1   441 
  227    BE517709Ta22P101C07P067E101F1_028.ab1   186 
  235  C BE517709Ta22P101C07P067E101R1_028.ab1   389 
  279    BE517709Ta22P101C07P067E101F1_028.ab1   238 
  283  C BE517709Ta22P101C07P067E101R1_028.ab1   341 
  335    BE517709Ta22P101C07P067E101F1_028.ab1   294 
  343  C BE517709Ta22P101C07P067E101R1_028.ab1   281 
  359    BE517709Ta22P101C07P067E101F1_028.ab1   318 
  383  C BE517709Ta22P101C07P067E101R1_028.ab1   241 
  391    BE517709Ta22P101C07P067E101F1_028.ab1   350 
  399  C BE517709Ta22P101C07P067E101R1_028.ab1   225 
  407    BE517709Ta22P101C07P067E101F1_028.ab1   366 
  415  C BE517709Ta22P101C07P067E101R1_028.ab1   209 
  431    BE517709Ta22P101C07P067E101F1_028.ab1   390 
  443  C BE517709Ta22P101C07P067E101R1_028.ab1   181 
  447    BE517709Ta22P101C07P067E101F1_028.ab1   406 
  459  C BE517709Ta22P101C07P067E101R1_028.ab1   165 
  471    BE517709Ta22P101C07P067E101F1_028.ab1   430 
  483  C BE517709Ta22P101C07P067E101R1_028.ab1   141 
  491    BE517709Ta22P101C07P067E101F1_028.ab1   450 
  499  C BE517709Ta22P101C07P067E101R1_028.ab1   125 
  503    BE517709Ta22P101C07P067E101F1_028.ab1   462 
  523  C BE517709Ta22P101C07P067E101R1_028.ab1   101 
  527    BE517709Ta22P101C07P067E101F1_028.ab1   486 
  543  C BE517709Ta22P101C07P067E101R1_028.ab1    81 
  555    BE517709Ta22P101C07P067E101F1_028.ab1   514 
Contig length: old 659, new 659

Contig length: old 659, new 659
New start: 0