No. words: 1271; after pruning: 1245


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:520)  488  1.34 0.00 0.19  BE517709Ta23P067E04P101F071F1_025.ab1        1   521 (154)  C BE517709Ta23P067E04P101F071R1_025.ab1   (76)   520     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE517709Ta23P067E04P101F071R1_025.ab1   596 
  351    BE517709Ta23P067E04P101F071F1_025.ab1   276 
  359  C BE517709Ta23P067E04P101F071R1_025.ab1   238 
  375    BE517709Ta23P067E04P101F071F1_025.ab1   300 
  395  C BE517709Ta23P067E04P101F071R1_025.ab1   202 
  403    BE517709Ta23P067E04P101F071F1_025.ab1   328 
  407  C BE517709Ta23P067E04P101F071R1_025.ab1   190 
  415    BE517709Ta23P067E04P101F071F1_025.ab1   340 
  471  C BE517709Ta23P067E04P101F071R1_025.ab1   126 
  479    BE517709Ta23P067E04P101F071F1_025.ab1   404 
  491  C BE517709Ta23P067E04P101F071R1_025.ab1   106 
  499    BE517709Ta23P067E04P101F071F1_025.ab1   424 
Contig length: old 750, new 750

Contig length: old 750, new 750
New start: 0