No. words: 1217; after pruning: 1191


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:561)  546  0.00 0.00 0.00  BE517709Ta24P101C07P067E101F1_026.ab1        1   562 (48)  C BE517709Ta24P101C07P067E101R1_026.ab1   (45)   562     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BE517709Ta24P101C07P067E101R1_026.ab1   607 
  469    BE517709Ta24P101C07P067E101F1_026.ab1   424 
  477  C BE517709Ta24P101C07P067E101R1_026.ab1   131 
  485    BE517709Ta24P101C07P067E101F1_026.ab1   440 
  489  C BE517709Ta24P101C07P067E101R1_026.ab1   119 
  505    BE517709Ta24P101C07P067E101F1_026.ab1   460 
  509  C BE517709Ta24P101C07P067E101R1_026.ab1    99 
  525    BE517709Ta24P101C07P067E101F1_026.ab1   480 
  541  C BE517709Ta24P101C07P067E101R1_026.ab1    67 
  553    BE517709Ta24P101C07P067E101F1_026.ab1   508 
Contig length: old 655, new 655

Contig length: old 655, new 655
New start: 0