No. words: 1227; after pruning: 1201


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:567)  549  0.18 0.00 0.00  BE517709Td01P101C07P067E101F1_015.ab1        1   568 (46)  C BE517709Td01P101C07P067E101R1_015.ab1   (45)   568     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BE517709Td01P101C07P067E101R1_015.ab1   613 
  363    BE517709Td01P101C07P067E101F1_015.ab1   318 
  367  C BE517709Td01P101C07P067E101R1_015.ab1   247 
  471    BE517709Td01P101C07P067E101F1_015.ab1   426 
  475  C BE517709Td01P101C07P067E101R1_015.ab1   139 
  487    BE517709Td01P101C07P067E101F1_015.ab1   442 
  495  C BE517709Td01P101C07P067E101R1_015.ab1   119 
  527    BE517709Td01P101C07P067E101F1_015.ab1   482 
  535  C BE517709Td01P101C07P067E101R1_015.ab1    79 
  547    BE517709Td01P101C07P067E101F1_015.ab1   502 
Contig length: old 659, new 659

Contig length: old 659, new 659
New start: 0