No. words: 1386; after pruning: 1360


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 11.6 (1,1:646)  608  0.93 0.00 0.16  BE517709Td02P067E04P101F071F1_016.ab1        4   647 (49)  C BE517709Td02P067E04P101F071R1_016.ab1   (47)   643     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BE517709Td02P067E04P101F071R1_016.ab1   690 
  219    BE517709Td02P067E04P101F071F1_016.ab1   175 
  387  C BE517709Td02P067E04P101F071R1_016.ab1   304 
  419    BE517709Td02P067E04P101F071F1_016.ab1   375 
  447  C BE517709Td02P067E04P101F071R1_016.ab1   244 
  451    BE517709Td02P067E04P101F071F1_016.ab1   407 
  455  C BE517709Td02P067E04P101F071R1_016.ab1   236 
  471    BE517709Td02P067E04P101F071F1_016.ab1   427 
Contig length: old 739, new 740

Contig length: old 740, new 740
New start: 0