No. words: 1227; after pruning: 1201


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.8 (1,1:567)  545  0.35 0.00 0.00  BE517709Td03P101C07P067E101F1_013.ab1        3   568 (49)  C BE517709Td03P101C07P067E101R1_013.ab1   (44)   566     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BE517709Td03P101C07P067E101R1_013.ab1   610 
  177    BE517709Td03P101C07P067E101F1_013.ab1   135 
  185  C BE517709Td03P101C07P067E101R1_013.ab1   426 
  277    BE517709Td03P101C07P067E101F1_013.ab1   235 
  281  C BE517709Td03P101C07P067E101R1_013.ab1   330 
  341    BE517709Td03P101C07P067E101F1_013.ab1   299 
  349  C BE517709Td03P101C07P067E101R1_013.ab1   262 
  377    BE517709Td03P101C07P067E101F1_013.ab1   335 
  381  C BE517709Td03P101C07P067E101R1_013.ab1   230 
  393    BE517709Td03P101C07P067E101F1_013.ab1   351 
  401  C BE517709Td03P101C07P067E101R1_013.ab1   210 
  409    BE517709Td03P101C07P067E101F1_013.ab1   367 
  417  C BE517709Td03P101C07P067E101R1_013.ab1   194 
  473    BE517709Td03P101C07P067E101F1_013.ab1   431 
  481  C BE517709Td03P101C07P067E101R1_013.ab1   130 
  509    BE517709Td03P101C07P067E101F1_013.ab1   467 
  545  C BE517709Td03P101C07P067E101R1_013.ab1    66 
  553    BE517709Td03P101C07P067E101F1_013.ab1   511 
  597  C BE517709Td03P101C07P067E101R1_013.ab1    14 
  601    BE517709Td03P101C07P067E101F1_013.ab1   559 
Contig length: old 659, new 659

Contig length: old 659, new 659
New start: 0